Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated Dec 22, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Golden Retriever (n=938)
1002	380 365 281 181	0.0005
1003	387 375 277 186	0.1482
1006	387 375 293 180	0.0149
1008	386 373 289 182	0.0016
1011	376 365 281 180	0.0005
1012	388 369 289 188	0.0011
1014	375 373 287 178	0.0448
1016	382 371 277 178	0.0043
1030	380 373 293 178	0.0011
1040	380 371 277 186	0.0005
1050	380 371 289 182	0.0005
1059	390 371 291 182	0.0005
1062	382 371 277 183	0.0864
1065	380 371 277 181	0.2708
1066	376 375 277 178	0.2767
1067	376 373 277 178	0.0437
1068	380 373 287 181	0.0490
1069	380 365 281 184	0.0373
1070	380 375 291 178	0.0128
1071	380 373 277 178	0.0005
1121	380 371 277 183	0.0005
1128	384 376 287 182	0.0005
1129	382 371 277 181	0.0005
1134	384 365 291 178	0.0005
1137	383 371 281 184	0.0011
1144	390 369 289 182	0.0005
1145	392 373 281 186	0.0005

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Golden Retriever (n=938)
2001	343 324 284	0.1487
2003	343 324 282	0.0219
2005	339 322 280	0.0133
2007	351 327 280	0.0149
2012	345 322 280	0.0005
2017	343 322 280	0.0373
2021	339 324 268	0.0864
2022	339 327 282	0.0005
2023	341 323 282	0.0011
2029	337 324 268	0.0005
2037	341 327 280	0.0133
2045	339 325 284	0.0378
2046	339 329 280	0.2516
2047	339 331 280	0.0101
2048	339 331 282	0.2708
2049	339 331 284	0.0011
2050	341 327 284	0.0314
2051	343 331 282	0.0112
2052	345 321 280	0.0021
2053	343 324 280	0.0283
2059	343 324 276	0.0005
2079	343 323 278	0.0005
2085	345 325 280	0.0011
2086	339 329 284	0.0139
2088	339 329 268	0.0011

Allele Frequencies

#	Locus Name	Allele	Golden Retriever (n=940)
1	AHT121	90	0.0005
		96	0.2984
		98	0.0463
		100	0.0032
		102	0.4505
		104	0.0133
		106	0.1606
		108	0.0149
		110	0.0117
		112	0.0005
2	AHT137	131	0.1496
		133	0.1374
		135	0.0005
		137	0.1512
		141	0.0005
		143	0.1001
		145	0.0245
		147	0.1006
		149	0.1821
		151	0.1113
		153	0.0410
		155	0.0011
3	AHTH130	111	0.0005
		117	0.0389
		119	0.0011
		121	0.3621
		123	0.0016
		125	0.2977
		127	0.0021
		129	0.2945
		131	0.0016
4	AHTh171-A	219	0.6097
		221	0.0005
		223	0.0272
		225	0.1826
		227	0.1459
		229	0.0005
		233	0.0016
		235	0.0011
		237	0.0309
5	AHTh260	236	0.0005
		238	0.0037
		240	0.0192
		242	0.1214
		244	0.5421
		246	0.2226
		248	0.0708
		250	0.0027
		252	0.0021
		254	0.0149
6	AHTk211	87	0.0016
		89	0.0777
		91	0.1118
		93	0.6640
		95	0.0330
		97	0.1118
7	AHTk253	284	0.0032
		286	0.3568
		288	0.2657
		290	0.0122
		292	0.3621
8	C22.279	110	0.0005
		116	0.2234
		118	0.5112
		120	0.0697
		124	0.0394
		126	0.1559
9	FH2001	124	0.0894
		132	0.1984
		136	0.0293
		140	0.0452
		144	0.3564
		148	0.1681
		152	0.0963
		156	0.0160
		158	0.0005
		160	0.0005
10	FH2054	148	0.1656
		152	0.0144
		156	0.3557
		160	0.0485
		164	0.0240
		168	0.2417
		172	0.1305
		176	0.0192
		180	0.0005
11	FH2848	232	0.0772
		234	0.0383
		236	0.0277
		238	0.4601
		240	0.3951
		242	0.0011
		244	0.0005
12	INRA21	91	0.2226
		95	0.0879
		97	0.0091
		99	0.0756
		101	0.2918
		103	0.3115
		105	0.0016
13	INU005	110	0.1245
		122	0.0005
		124	0.2324
		126	0.5176
		128	0.1207
		132	0.0043
14	INU030	144	0.4052
		150	0.5053
		152	0.0895
15	INU055	210	0.1511
		212	0.0005
		214	0.4426
		216	0.2840
		218	0.1218
16	LEI004	85	0.0819
		93	0.0005
		95	0.3149
		97	0.0963
		105	0.0016
		107	0.5016
		109	0.0021
		111	0.0011
17	REN105L03	227	0.0016
		231	0.0831
		233	0.5538
		235	0.2204
		237	0.0080
		239	0.0474
		241	0.0852
		243	0.0005
18	REN162C04	202	0.0873
		204	0.3940
		206	0.2961
		208	0.2220
		212	0.0005
19	REN169D01	202	0.3552
		210	0.0011
		212	0.1395
		216	0.3850
		218	0.0889
		220	0.0304
20	REN169O18	160	0.0005
		162	0.3072
		164	0.3962
		166	0.0011
		168	0.0905
		170	0.1938
		172	0.0101
		174	0.0005
21	REN247M23	264	0.0011
		268	0.3781
		270	0.0016
		272	0.3946
		276	0.0011
		278	0.2236
22	REN54P11	222	0.0485
		226	0.0480
		228	0.0181
		230	0.0005
		232	0.3028
		234	0.4499
		236	0.1071
		238	0.0251
23	REN64E19	139	0.0287
		143	0.0064
		145	0.2824
		147	0.3532
		149	0.1856
		153	0.1431
		155	0.0005
24	VGL0760	12	0.0016
		13	0.0021
		14	0.0011
		18.2	0.0074
		19.2	0.1617
		20.2	0.1681
		21.2	0.3351
		22.2	0.0878
		23.2	0.2090
		24.2	0.0223
		25.2	0.0037
25	VGL0910	14	0.0122
		15	0.0170
		15.1	0.0197
		16	0.0043
		16.1	0.0027
		17.1	0.0457
		18.1	0.4457
		19	0.0043
		19.1	0.3048
		20	0.0043
		20.1	0.0351
		21	0.0005
		21.1	0.0798
		22.1	0.0234
		23.1	0.0005
26	VGL1063	8	0.0059
		9	0.0011
		12	0.0314
		13	0.6144
		14	0.0415
		15	0.0032
		17	0.0011
		18	0.2282
		19	0.0654
		20	0.0080
27	VGL1165	14	0.0011
		15	0.0005
		16	0.0915
		17	0.2176
		18	0.0085
		19	0.1367
		20	0.0011
		21	0.0346
		26	0.0021
		27	0.1112
		28	0.3213
		29	0.0165
		30	0.0532
		31	0.0043
28	VGL1828	14	0.1191
		15	0.0979
		16	0.0324
		17	0.0005
		18	0.0011
		19	0.4080
		20	0.1186
		21	0.0122
		22	0.2069
		23	0.0032
29	VGL2009	9	0.0005
		10	0.0032
		11	0.0074
		12	0.1489
		13	0.2170
		14	0.1840
		15	0.3819
		16	0.0564
		17	0.0005
30	VGL2409	13	0.0016
		14	0.1704
		15	0.0873
		16	0.3546
		17	0.3408
		18	0.0240
		19	0.0186
		20	0.0027
31	VGL2918	11	0.0011
		12	0.2904
		13	0.1117
		14	0.0074
		15	0.0005
		17.3	0.0191
		18.3	0.0080
		19.3	0.5074
		20.3	0.0516
		21.3	0.0016
		22.3	0.0011
32	VGL3008	13	0.0021
		14	0.4137
		15	0.0027
		16	0.0005
		17	0.0032
		18	0.0362
		19	0.2455
		20	0.0532
		21	0.0724
		22	0.0559
		23	0.0692
		24	0.0421
		25	0.0032
33	VGL3235	11	0.0005
		12	0.4233
		13	0.0059
		14	0.0596
		15	0.4207
		16	0.0373
		17	0.0272
		18	0.0256

Standard genetic assessment based on 33 autosomal STR loci

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	940	8.455	3.422	0.652	0.687	0.052
	SE		0.466	0.179	0.014	0.013	0.006

Standard genetic assessment based on 7 STRs in the DLA region

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	940	7.286	2.951	0.601	0.614	0.019
	SE		0.661	0.341	0.057	0.059	0.005

Standard genetic assessment for individual STR loci

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	940	10	3.120	0.624	0.679	0.081
2	AHT137	940	12	7.569	0.837	0.868	0.036
3	AHTH130	940	9	3.247	0.641	0.692	0.074
4	AHTh171-A	940	9	2.336	0.529	0.572	0.075
5	AHTh260	940	10	2.749	0.543	0.636	0.146
6	AHTk211	940	6	2.114	0.522	0.527	0.010
7	AHTk253	940	5	3.038	0.651	0.671	0.030
8	C22.279	940	6	2.925	0.593	0.658	0.100
9	FH2001	940	10	4.650	0.748	0.785	0.047
10	FH2054	940	9	4.294	0.748	0.767	0.025
11	FH2848	940	7	2.660	0.561	0.624	0.101
12	INRA21	940	7	4.078	0.753	0.755	0.002
13	INU005	940	6	2.841	0.620	0.648	0.043
14	INU030	940	3	2.339	0.555	0.572	0.031
15	INU055	940	5	3.183	0.662	0.686	0.035
16	LEI004	940	8	2.727	0.604	0.633	0.046
17	REN105L03	940	8	2.690	0.576	0.628	0.083
18	REN162C04	940	5	3.335	0.635	0.700	0.093
19	REN169D01	940	6	3.304	0.653	0.697	0.064
20	REN169O18	940	8	3.365	0.709	0.703	-0.009
21	REN247M23	940	6	2.868	0.614	0.651	0.057
22	REN54P11	940	8	3.214	0.657	0.689	0.047
23	REN64E19	940	7	3.841	0.687	0.740	0.071
24	VGL0760	940	11	4.573	0.763	0.781	0.024
25	VGL0910	940	15	3.303	0.653	0.697	0.063
26	VGL1063	940	10	2.290	0.549	0.563	0.026
27	VGL1165	940	14	5.145	0.765	0.806	0.051
28	VGL1828	940	10	4.027	0.727	0.752	0.033
29	VGL2009	940	9	3.964	0.719	0.748	0.038
30	VGL2409	940	8	3.578	0.703	0.721	0.024
31	VGL2918	940	11	2.797	0.635	0.643	0.012
32	VGL3008	940	13	3.991	0.709	0.749	0.054
33	VGL3235	940	8	2.758	0.580	0.637	0.090

Standard genetic assessment for 7 STRs in the DLA region

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	940	11	3.579	0.710	0.721	0.015
2	DLA I-4ACA	940	6	2.785	0.637	0.641	0.006
3	DLA I-4BCT	940	6	1.424	0.298	0.298	-0.000
4	DLA1131	940	8	3.545	0.690	0.718	0.039
5	5ACA	940	6	1.868	0.453	0.465	0.025
6	5ACT	940	8	4.056	0.729	0.753	0.032
7	5BCA	940	6	3.400	0.693	0.706	0.018

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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