Statistics and Breed-wide Allele Frequency - Giant Schnauzer

Updated Nov 13, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Giant Schnauzer (n=338)
1006	387 375 293 180	0.046
1008	386 373 289 182	0.036
1011	376 365 281 180	0.010
1014	375 373 287 178	0.235
1016	382 371 277 178	0.044
1017	386 373 289 178	0.084
1054	382 379 277 184	0.003
1065	380 371 277 181	0.003
1067	376 373 277 178	0.001
1068	380 373 287 181	0.056
1091	381 371 277 181	0.034
1092	376 379 277 181	0.275
1129	382 371 277 181	0.001
1159	395 379 277 181	0.166
1181	381 371 277 182	0.003
1263	394 369 277 180	0.001

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Giant Schnauzer (n=338)
2001	343 324 284	0.006
2003	343 324 282	0.030
2005	339 322 280	0.007
2006	339 325 280	0.151
2007	351 327 280	0.046
2012	345 322 280	0.010
2014	339 322 284	0.004
2017	343 322 280	0.001
2022	339 327 282	0.003
2031	339 322 282	0.040
2033	339 323 282	0.037
2037	341 327 280	0.367
2050	341 327 284	0.142
2053	343 324 280	0.065
2060	343 323 284	0.003
2076	345 322 282	0.001
2083	339 324 282	0.001
2090	339 322 278	0.084

Allele Frequencies

#	Locus Name	Allele	Giant Schnauzer (n=338)
1	AHT121	80	0.120
		92	0.139
		94	0.139
		96	0.001
		98	0.003
		100	0.001
		102	0.314
		104	0.104
		106	0.024
		108	0.087
		110	0.006
		112	0.055
		114	0.007
2	AHT137	131	0.061
		133	0.009
		137	0.003
		141	0.253
		143	0.001
		147	0.664
		149	0.004
		151	0.004
3	AHTH130	117	0.320
		119	0.071
		121	0.155
		125	0.028
		127	0.015
		129	0.145
		131	0.259
		133	0.006
		135	0.001
4	AHTh171-A	219	0.395
		221	0.040
		225	0.243
		227	0.003
		229	0.001
		233	0.274
		235	0.044
5	AHTh260	238	0.185
		240	0.234
		242	0.012
		246	0.485
		248	0.068
		250	0.010
		252	0.006
6	AHTk211	87	0.574
		91	0.251
		93	0.065
		95	0.109
7	AHTk253	284	0.010
		286	0.404
		288	0.160
		290	0.117
		292	0.201
		294	0.108
8	C22.279	116	0.099
		118	0.555
		122	0.025
		124	0.265
		126	0.056
9	FH2001	128	0.188
		132	0.056
		136	0.006
		144	0.377
		148	0.359
		152	0.012
		158	0.001
10	FH2054	144	0.018
		152	0.200
		156	0.306
		160	0.311
		164	0.001
		168	0.117
		172	0.047
11	FH2848	230	0.003
		232	0.031
		234	0.207
		236	0.024
		238	0.108
		240	0.553
		242	0.012
		244	0.062
12	INRA21	95	0.485
		97	0.016
		99	0.013
		101	0.164
		103	0.145
		105	0.176
13	INU005	110	0.004
		122	0.003
		124	0.790
		126	0.112
		128	0.010
		130	0.004
		132	0.075
14	INU030	144	0.229
		146	0.277
		148	0.006
		150	0.203
		152	0.256
		154	0.030
15	INU055	208	0.003
		210	0.469
		214	0.074
		216	0.260
		218	0.170
		220	0.024
16	LEI004	83	0.001
		85	0.093
		95	0.830
		103	0.001
		107	0.074
17	REN105L03	231	0.025
		233	0.919
		235	0.034
		239	0.001
		241	0.021
18	REN162C04	200	0.030
		202	0.281
		204	0.203
		206	0.291
		208	0.195
19	REN169D01	202	0.009
		210	0.004
		212	0.003
		216	0.879
		220	0.052
		222	0.053
20	REN169O18	160	0.145
		162	0.265
		164	0.007
		166	0.141
		168	0.272
		170	0.167
		172	0.003
21	REN247M23	268	0.574
		270	0.189
		272	0.204
		276	0.033
22	REN54P11	222	0.010
		226	0.219
		228	0.040
		232	0.021
		234	0.010
		236	0.442
		238	0.257
23	REN64E19	145	0.405
		147	0.244
		153	0.349
		155	0.001
24	VGL0760	12	0.738
		13	0.013
		14	0.003
		18.2	0.061
		19.2	0.037
		20.2	0.024
		21.2	0.052
		22.2	0.049
		23.2	0.024
25	VGL0910	16	0.052
		16.1	0.010
		17	0.003
		17.1	0.237
		18.1	0.115
		19.1	0.283
		20.1	0.170
		21.1	0.031
		22.1	0.090
		23.1	0.007
		24.1	0.001
26	VGL1063	8	0.001
		9	0.003
		11	0.012
		13	0.225
		14	0.306
		15	0.049
		16	0.034
		17	0.003
		18	0.145
		19	0.031
		20	0.185
		21	0.001
		22	0.004
27	VGL1165	15	0.102
		16	0.151
		17	0.244
		18	0.003
		19	0.121
		21	0.003
		22	0.078
		26	0.055
		27	0.001
		28	0.004
		29	0.188
		30	0.047
		33	0.001
28	VGL1828	14	0.105
		15	0.001
		16	0.130
		17	0.320
		18	0.015
		19	0.098
		20	0.115
		21	0.189
		22	0.003
		23	0.024
29	VGL2009	9	0.006
		11	0.037
		12	0.037
		13	0.598
		14	0.087
		15	0.234
		16	0.001
30	VGL2409	13	0.022
		14	0.022
		15	0.176
		16	0.040
		17	0.115
		18	0.386
		19	0.071
		20	0.161
		21	0.006
31	VGL2918	11	0.003
		12	0.257
		13	0.169
		14	0.075
		15	0.012
		16	0.004
		17.3	0.163
		18.3	0.173
		19.3	0.107
		20.3	0.022
		21.3	0.010
		22.3	0.004
32	VGL3008	10	0.188
		13	0.004
		15	0.117
		16	0.067
		17	0.009
		18	0.170
		19	0.268
		20	0.166
		21	0.012
33	VGL3235	13	0.288
		14	0.453
		15	0.132
		16	0.086
		18	0.041

Standard genetic assessment based on 33 autosomal STR loci

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	338	7.485	3.516	0.623	0.652	0.054
	SE		0.450	0.247	0.031	0.031	0.011

Standard genetic assessment based on 7 STRs in the DLA region

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	338	5.571	2.915	0.621	0.630	0.013
	SE		0.566	0.374	0.028	0.030	0.007

Standard genetic assessment for individual STR loci

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	338	13	5.768	0.760	0.827	0.080
2	AHT137	338	8	1.965	0.491	0.491	-0.000
3	AHTH130	338	9	4.538	0.763	0.780	0.021
4	AHTh171-A	338	7	3.409	0.713	0.707	-0.009
5	AHTh260	338	7	3.038	0.707	0.671	-0.054
6	AHTk211	338	4	2.446	0.518	0.591	0.124
7	AHTk253	338	6	3.929	0.704	0.745	0.055
8	C22.279	338	5	2.555	0.559	0.609	0.081
9	FH2001	338	7	3.224	0.604	0.690	0.125
10	FH2054	338	7	4.059	0.760	0.754	-0.009
11	FH2848	338	8	2.731	0.607	0.634	0.043
12	INRA21	338	6	3.176	0.636	0.685	0.072
13	INU005	338	7	1.556	0.325	0.358	0.090
14	INU030	338	6	4.227	0.734	0.763	0.039
15	INU055	338	6	3.099	0.627	0.677	0.074
16	LEI004	338	5	1.423	0.299	0.297	-0.006
17	REN105L03	338	5	1.182	0.136	0.154	0.116
18	REN162C04	338	5	4.098	0.716	0.756	0.053
19	REN169D01	338	6	1.286	0.160	0.222	0.281
20	REN169O18	338	7	4.695	0.751	0.787	0.045
21	REN247M23	338	4	2.451	0.583	0.592	0.015
22	REN54P11	338	7	3.205	0.624	0.688	0.093
23	REN64E19	338	4	2.892	0.639	0.654	0.023
24	VGL0760	338	9	1.798	0.376	0.444	0.153
25	VGL0910	338	11	5.261	0.790	0.810	0.025
26	VGL1063	338	13	4.897	0.743	0.796	0.067
27	VGL1165	338	13	6.485	0.831	0.846	0.017
28	VGL1828	338	10	5.275	0.784	0.810	0.033
29	VGL2009	338	7	2.369	0.547	0.578	0.053
30	VGL2409	338	9	4.405	0.772	0.773	0.001
31	VGL2918	338	12	5.919	0.837	0.831	-0.007
32	VGL3008	338	9	5.503	0.796	0.818	0.027
33	VGL3235	338	5	3.179	0.651	0.685	0.050

Standard genetic assessment for 7 STRs in the DLA region

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	338	9	5.295	0.790	0.811	0.026
2	DLA I-4ACA	338	6	2.654	0.615	0.623	0.012
3	DLA I-4BCT	338	5	2.597	0.601	0.615	0.023
4	DLA1131	338	5	2.352	0.586	0.575	-0.019
5	5ACA	338	5	2.631	0.615	0.620	0.007
6	5ACT	338	5	2.716	0.607	0.632	0.040
7	5BCA	338	4	2.157	0.536	0.536	0.002

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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