Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

Updated Jul 15, 2026

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Bernese Mountain Dog (n=209)
1006	387 375 293 180	0.072
1016	382 371 277 178	0.043
1030	380 373 293 178	0.019
1068	380 373 287 181	0.072
1094	395 375 277 176	0.112
1121	380 371 277 183	0.096
1160	386 369 289 176	0.562
1221	380 365 293 180	0.017
1256	386 365 281 180	0.002
1267	386 375 277 176	0.002
1292	386 369 289 178	0.002

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Bernese Mountain Dog (n=209)
2001	343 324 284	0.019
2005	339 322 280	0.115
2007	351 327 280	0.077
2012	345 322 280	0.002
2021	339 324 268	0.043
2024	343 323 280	0.557
2053	343 324 280	0.072
2071	339 322 286	0.096
2118	347 327 280	0.017
2134	343 323 268	0.002

Allele Frequencies

#	Locus Name	Allele	Bernese Mountain Dog (n=210)
1	AHT121	80	0.002
		96	0.045
		98	0.576
		100	0.100
		102	0.236
		104	0.017
		106	0.002
		108	0.021
2	AHT137	131	0.412
		137	0.290
		141	0.026
		147	0.060
		149	0.181
		153	0.031
3	AHTH130	121	0.014
		123	0.486
		127	0.060
		129	0.167
		135	0.005
		139	0.267
		143	0.002
4	AHTh171-A	219	0.514
		225	0.143
		235	0.343
5	AHTh260	240	0.031
		244	0.245
		246	0.221
		250	0.088
		252	0.276
		254	0.121
		256	0.017
6	AHTk211	87	0.824
		91	0.043
		93	0.076
		97	0.055
		99	0.002
7	AHTk253	286	0.150
		288	0.410
		290	0.143
		292	0.298
8	C22.279	116	0.126
		118	0.271
		120	0.002
		124	0.600
9	FH2001	132	0.557
		136	0.098
		140	0.098
		144	0.017
		148	0.024
		152	0.207
10	FH2054	148	0.005
		152	0.152
		156	0.588
		160	0.029
		164	0.114
		168	0.112
11	FH2848	234	0.348
		238	0.076
		242	0.362
		244	0.214
12	INRA21	95	0.743
		101	0.079
		103	0.179
13	INU005	124	0.036
		126	0.319
		128	0.498
		130	0.145
		132	0.002
14	INU030	144	0.498
		146	0.086
		150	0.395
		152	0.021
15	INU055	210	0.807
		212	0.069
		214	0.005
		218	0.119
16	LEI004	85	0.036
		95	0.793
		107	0.136
		109	0.005
		111	0.031
17	REN105L03	229	0.150
		231	0.319
		233	0.007
		237	0.219
		241	0.305
18	REN162C04	202	0.207
		204	0.171
		206	0.514
		208	0.107
19	REN169D01	202	0.002
		212	0.014
		216	0.067
		218	0.102
		220	0.805
		222	0.010
20	REN169O18	160	0.012
		162	0.405
		164	0.050
		166	0.002
		168	0.474
		170	0.057
21	REN247M23	268	0.040
		270	0.748
		272	0.060
		274	0.081
		276	0.012
		278	0.060
22	REN54P11	222	0.595
		226	0.064
		228	0.090
		232	0.055
		234	0.012
		236	0.014
		238	0.169
23	REN64E19	139	0.012
		145	0.702
		147	0.086
		153	0.200
24	VGL0760	12	0.002
		13	0.219
		14	0.605
		15	0.002
		19.2	0.002
		20.2	0.026
		21.2	0.010
		22.2	0.102
		23.2	0.014
		24.2	0.017
25	VGL0910	12	0.640
		13	0.005
		17.1	0.007
		18.1	0.019
		19.1	0.055
		20.1	0.007
		21.1	0.114
		22.1	0.138
		23.1	0.014
26	VGL1063	8	0.148
		12	0.155
		13	0.036
		14	0.283
		15	0.024
		16	0.031
		17	0.005
		18	0.024
		19	0.269
		20	0.019
		21	0.002
		22	0.005
27	VGL1165	15	0.026
		16	0.002
		17	0.002
		18	0.117
		20	0.005
		21	0.631
		26	0.119
		27	0.005
		28	0.064
		30	0.026
		31	0.002
28	VGL1828	14	0.179
		15	0.117
		16	0.195
		17	0.033
		19	0.024
		20	0.450
		21	0.002
29	VGL2009	10	0.033
		13	0.071
		14	0.164
		15	0.724
		16	0.007
30	VGL2409	13	0.571
		14	0.002
		16	0.005
		17	0.102
		18	0.305
		19	0.014
31	VGL2918	12	0.017
		13	0.710
		14	0.212
		15	0.021
		16	0.007
		17.3	0.005
		19.3	0.029
32	VGL3008	13	0.014
		15	0.448
		16	0.029
		17	0.024
		18	0.412
		19	0.038
		20	0.036
33	VGL3235	13	0.131
		14	0.279
		15	0.012
		16	0.302
		17	0.145
		18	0.052
		19	0.074
		20	0.005

Standard genetic assessment based on 33 autosomal STR loci

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	210	6.091	2.632	0.576	0.577	0.006
	SE		0.372	0.158	0.025	0.023	0.009

Standard genetic assessment based on 7 STRs in the DLA region

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	210	4.714	2.258	0.575	0.537	-0.069
	SE		0.171	0.159	0.047	0.042	0.006

Standard genetic assessment for individual STR loci

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	210	8	2.498	0.586	0.600	0.023
2	AHT137	210	6	3.425	0.662	0.708	0.065
3	AHTH130	210	7	2.953	0.619	0.661	0.064
4	AHTh171-A	210	3	2.485	0.614	0.598	-0.028
5	AHTh260	210	7	4.780	0.810	0.791	-0.024
6	AHTk211	210	5	1.451	0.290	0.311	0.065
7	AHTk253	210	4	3.342	0.681	0.701	0.028
8	C22.279	210	4	2.224	0.557	0.550	-0.012
9	FH2001	210	6	2.679	0.657	0.627	-0.048
10	FH2054	210	6	2.528	0.600	0.605	0.007
11	FH2848	210	4	3.294	0.719	0.696	-0.032
12	INRA21	210	3	1.695	0.390	0.410	0.048
13	INU005	210	5	2.690	0.643	0.628	-0.023
14	INU030	210	4	2.429	0.600	0.588	-0.020
15	INU055	210	4	1.492	0.329	0.330	0.003
16	LEI004	210	5	1.540	0.305	0.351	0.131
17	REN105L03	210	5	3.771	0.710	0.735	0.034
18	REN162C04	210	4	2.871	0.590	0.652	0.094
19	REN169D01	210	6	1.509	0.352	0.337	-0.045
20	REN169O18	210	6	2.537	0.633	0.606	-0.046
21	REN247M23	210	6	1.741	0.414	0.426	0.027
22	REN54P11	210	7	2.509	0.595	0.601	0.010
23	REN64E19	210	4	1.849	0.486	0.459	-0.058
24	VGL0760	210	10	2.350	0.633	0.575	-0.102
25	VGL0910	210	9	2.242	0.543	0.554	0.020
26	VGL1063	210	12	4.946	0.829	0.798	-0.039
27	VGL1165	210	11	2.318	0.567	0.569	0.003
28	VGL1828	210	7	3.475	0.743	0.712	-0.043
29	VGL2009	210	5	1.795	0.414	0.443	0.064
30	VGL2409	210	6	2.325	0.548	0.570	0.039
31	VGL2918	210	7	1.818	0.429	0.450	0.048
32	VGL3008	210	7	2.671	0.662	0.626	-0.058
33	VGL3235	210	8	4.637	0.795	0.784	-0.014

Standard genetic assessment for 7 STRs in the DLA region

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	210	5	2.596	0.667	0.615	-0.084
2	DLA I-4ACA	210	5	2.621	0.670	0.619	-0.083
3	DLA I-4BCT	210	5	2.501	0.643	0.600	-0.071
4	DLA1131	210	5	2.065	0.552	0.516	-0.071
5	5ACA	210	5	2.026	0.529	0.507	-0.044
6	5ACT	210	4	2.595	0.662	0.615	-0.077
7	5BCA	210	4	1.400	0.300	0.286	-0.050

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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